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IP Storage: use ragged list Zarrv3 - #108

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indecisiveuser wants to merge 28 commits into

JaneliaSciComp:masterfrom

indecisiveuser:ip-storage-update

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IP Storage: use ragged list Zarrv3#108
indecisiveuser wants to merge 28 commits into
JaneliaSciComp:masterfrom
indecisiveuser:ip-storage-update

Commits on Sep 28, 2026
- IP storage update first pass: flat list (with separate index)
  indecisiveuser
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  2289e42
- change storage mechanism to zarrv3
  indecisiveuser
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  8e1371a
- file write safety / only stage one file per worker
  indecisiveuser
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  6c0d7a9
- code quality updates
  indecisiveuser
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  bc5e25d
- slightly improving readability
  indecisiveuser
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  95d1957
- change compression scheme: raw instead of zstd; remove unnecessary fsync
  indecisiveuser
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  c06fccc
- update license year
  indecisiveuser
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  1366fdc
- key instances by loc, not URI (avoid double instances given URI trailing slashes etc)
  indecisiveuser
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  b0d6389
Commits on Sep 30, 2026
- Merge branch 'master' into ip-storage-update
  StephanPreibisch
  committed
  8a33c8c
Commits on Oct 2, 2026
- GUI IP deletions should occur before xml save
  indecisiveuser
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  63a586b
- remove on the fly split option per our hallway discussion
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  9c8af87
- add optional attributes as columns
  indecisiveuser
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  336ae00
- refactoring ip storage update
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  0311000
- style improvements
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  e185556
- simplification changes
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  c90e33a
- minor fixes
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  7cc49ea
- fixing var names
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  b3ec896
- make InterestPointsN5 static only
  indecisiveuser
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  5909ceb
- change example to zarr
  indecisiveuser
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  26c064b
- clean up dead branch
  indecisiveuser
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  e26300e
Commits on Oct 5, 2026
- move location of getCorrespondingInterestPointsCopy
  indecisiveuser
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  2697a0d
- privatize lazycontainer in zarrstore
  indecisiveuser
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  550df8e
- remove pointless cast
  indecisiveuser
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  a320924
- avoid per-element cursor reads while flattening the array
  indecisiveuser
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  bc24c82
- create helper function to deduplicate logic
  indecisiveuser
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  238f96e
- improve mem efficiency
  indecisiveuser
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  5756648
- update claude.md
  indecisiveuser
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  dee1577
Commits on Oct 6, 2026
- add shading for n5 zarrv3 (same as BigStitcher-Spark)
  indecisiveuser
  committed
  11d4142

Commits

Commits on Sep 28, 2026

Commits on Sep 30, 2026

Commits on Oct 2, 2026

Commits on Oct 5, 2026

Commits on Oct 6, 2026